BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB008C03LP1|AL425824
(793 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1145 615 e-176
3x_Contig1383 520 e-147
>3x_Contig1145
Length = 5226
Score = 615 bits (310), Expect = e-176
Identities = 311/312 (99%)
Strand = Plus / Minus
Query: 482 ggtgatatacatcacaaaatgaatgcyagtactagtaggatgatcaatgcaatgattaag 541
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 5226 ggtgatatacatcacaaaatgaatgctagtactagtaggatgatcaatgcaatgattaag 5167
Query: 542 agaaagatgcagcagtcgttgacacgttctttgttgtgttcgtagacccattctagttgt 601
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5166 agaaagatgcagcagtcgttgacacgttctttgttgtgttcgtagacccattctagttgt 5107
Query: 602 cgtcttcctctggaaagtttgttcatgactccgtcgacatttccgtccatttcttcgaga 661
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5106 cgtcttcctctggaaagtttgttcatgactccgtcgacatttccgtccatttcttcgaga 5047
Query: 662 atcatgccctgttctgttagttcttgacccattgtagatgcctgtagatgaatgttttgc 721
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5046 atcatgccctgttctgttagttcttgacccattgtagatgcctgtagatgaatgttttgc 4987
Query: 722 attgtctggtgaatcatgtccaattgattgtcttgttcacggagtaattgctcctgtacg 781
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4986 attgtctggtgaatcatgtccaattgattgtcttgttcacggagtaattgctcctgtacg 4927
Query: 782 gcgtcgtggttt 793
||||||||||||
Sbjct: 4926 gcgtcgtggttt 4915
>3x_Contig1383
Length = 6139
Score = 520 bits (262), Expect = e-147
Identities = 272/274 (99%), Gaps = 1/274 (0%)
Strand = Plus / Minus
Query: 1 aatgaatgccagtcagtattatcaactccgtcctaatcctagtgcccttcgcctcttaaa 60
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 280 aatgaatgccagtaagtattatcaactccgtcctaatcctagtgcccttcgcctcttaaa 221
Query: 61 tgaaatcgctctcttcgatagtcttggatctgacactgtagcttgacgtgcaaaaaaccc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 220 tgaaatcgctctcttcgatagtcttggatctgacactgtagcttgacgtgcaaaaaaccc 161
Query: 121 aatccagcaagcaaccttttgcttttgtaccttaaaaactaacttggtcttaatactttt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 160 aatccagcaagcaaccttttgcttttgtaccttaaaaactaacttggtcttaatactttt 101
Query: 181 ccatttctcagtttccatactttctatatatttcaacaaaaaaatcagttcgaaagctcc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 100 ccatttctcagtttccatactttctatatatttcaacaaaaaaatcagttcgaaagctcc 41
Query: 241 attgtggtacgatttcaaagccgctgtcgtatgt 274
||||| ||||||||||||||||||||||||||||
Sbjct: 40 attgt-gtacgatttcaaagccgctgtcgtatgt 8
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5800
Number of Sequences: 1807
Number of extensions: 5800
Number of successful extensions: 58
Number of sequences better than 1.0e-20: 2
length of query: 793
length of database: 10,358,551
effective HSP length: 16
effective length of query: 777
effective length of database: 10,329,639
effective search space: 8026129503
effective search space used: 8026129503
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.7 bits)